Source code for src.data_access.via_DMS.Input

[docs]class Input: ''' Handle & validate User input ''' def __init__(self): self.job_nums = [] self.dataset_ids = [] self.datapackage_id = None
[docs] def other_input(self, InputType, UserInput): ''' changes input string to list of numbers. ''' if InputType ==1: self.datapackage_id = int(UserInput) if InputType ==2: ip = UserInput.split(',') for item in [_.strip() for _ in ip]: # print(">>",item, ">>",type(item)) self.dataset_ids.append(int(item)) if InputType ==3: ip = UserInput.split(',') for item in [_.strip() for _ in ip]: self.job_nums.append(int(item))
[docs] def user_input(self): ''' :return: ''' #FIXME : Need to be added execution using data_package_id while True: print("To run the Meta-protemoics data-analysis workflow \n" \ "Three options are available:\n" \ "1. enter a datapackage ID\n" \ "2. enter a set of dataset-IDs\n" \ "3. enter a set of JobNums\n\n" ) option = int(input("Which option would you like to proceed?\n")) if option is 1: # 1. Dpkg try : ip = int(input('datapackage ID\n')) self.datapackage_id = ip break except Exception as e: print("Incorrect data entered-Not an interger!") print('*' * 10) elif option is 2: # 2. set of DSs try: ip = input('set of dataset ids\n').split(',') for item in [_.strip() for _ in ip]: self.dataset_ids.append(int(item)) break except Exception as e: print("Incorrect data entered--Not an interger!") print('*'*10) elif option is 3: # 3. set of JobNums - MSGF+ try: ip = input("set of Job numbers\n").split(',') for item in [_.strip() for _ in ip]: self.job_nums.append(int(item)) break except Exception as e: print("Incorrect data entered--Not an interger!") print('*' * 10) else: print("Only available options are 1 or 2 or 3, please re-enter it!")